Thanks for the replies so far..
A little more info may help, firstly the motors are outrunner1500 watts each so the couplings are industrial helical types, ballraced, the shafts and tubes are absolutely true, anyway, the amplified sounds are nothing to do with the transmission system, it's the cavenous wooden hull that is the root cause.
No silicone will will ever be used in my models due to the contamination to any paint or varnish.
Rubber mounting the motors is not feasable in this case, o.k. maybe for smaller motors.
May well try some high density vibration absorbing foam which is often used in cars, the drawbacks are weight and price.
Mike.