If I just the keel, with nothing attached yet, I would consider remaking it.
I am assuming that the pieces of ply are in the same orientation. See pic. If this is the case I would flip one piece after cutting, before gluing. See pic. Any tensions balance out. This will be a lot simpler, and maybe even cheaper, than a work around.
I have done similar things cutting long square sections into 4, and re-gluing (before shaping), to make masts that stay straight; no matter how much humidity/temperature/etc. change.
One thing I have learned is that door skins seem to have cupping and bowing built into them, which may or may not be useful. I will not use them, even though off-cuts are an almost free source of wood for me.